Editing DynamO

'''DYNAMO''' (DYNAMics of discrete Objects) is a general, [[Event-driven molecular dynamics | event driven simulation]] code capable of simulating millions of particles in short times on commodity computers.
==Features==
Some of the features of DYNAMO are:

Optimised interactions for:
*[[Hard sphere model | Hard spheres]]
*[[Square well model | Square well]] and [[square shoulder model]]s 
*Square bonds
*Soft cores
*[[Parallel hard cubes | Parallel cubes]]
* Rough hard spheres (rotational degrees of freedom).
* Arbitrary stepped isotropic potentials.

Boundary conditions:
*[[Periodic boundary conditions]]
*[[Lees-Edwards boundary conditions | Lees-Edwards simple shear conditions]]
*Infinite dimensional systems.
*Semi-periodic systems.
*All are generalised for square and rectangular systems.

Analysis Tools:
*[[Histogram reweighting]] tools.
*[[Replica-exchange molecular dynamics | Replica exchange temperature optimisation]]
*[[Cluster algorithms |Cluster analysis]] of molecular structures to determine the fold-ability of polymer sequences and parameters.

==References==
<references/>
==External links==
*[http://www.marcusbannerman.co.uk/index.php/dynamo.html DYNAMO home page]
[[Category: Materials modelling and computer simulation codes]]