Carbon dioxide: Difference between revisions
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<ref>[http://jchemed.chem.wisc.edu/journal/issues/2009/May/abs566.html A. Herráez, R. M. Hanson, and L. Glasser "Interactive 3D phase diagrams using Jmol" Journal of Chemical Education '''86''': 566 (2009)] and [http://biomodel.uah.es/Jmol/plots/phase-diagrams/ website]</ref> | <ref>[http://jchemed.chem.wisc.edu/journal/issues/2009/May/abs566.html A. Herráez, R. M. Hanson, and L. Glasser "Interactive 3D phase diagrams using Jmol" Journal of Chemical Education '''86''': 566 (2009)] and [http://biomodel.uah.es/Jmol/plots/phase-diagrams/ website]</ref> | ||
<ref>[http://dx.doi.org/10.1063/1.4792443 G. Pérez-Sánchez, D. González-Salgado, M. M. Piñeiro, and C. Vega "Fluid-solid equilibrium of carbon dioxide as obtained from computer simulations of several popular potential models: The role of the quadrupole", Journal of Chemical Physics '''138''' 084506 (2013)]</ref> | <ref>[http://dx.doi.org/10.1063/1.4792443 G. Pérez-Sánchez, D. González-Salgado, M. M. Piñeiro, and C. Vega "Fluid-solid equilibrium of carbon dioxide as obtained from computer simulations of several popular potential models: The role of the quadrupole", Journal of Chemical Physics '''138''' 084506 (2013)]</ref> | ||
==Transport properties== | |||
<ref>[http://dx.doi.org/10.1063/1.4896538 C. G. Aimoli, E. J. Maginn and C. R. A. Abreu "Transport properties of carbon dioxide and methane from molecular dynamics simulations", Journal of Chemical Physics '''141''' 134101 (2014)]</ref>. | |||
==References== | ==References== | ||
<references/> | <references/> |
Revision as of 11:04, 8 October 2014
<jmol> <jmolApplet> <script>set spin X 10; spin on</script> <size>200</size> <color>lightgrey</color> <wikiPageContents>carbon_dioxide.pdb</wikiPageContents> </jmolApplet></jmol> |
Carbon dioxide (CO2)
Models
BBV
The BBV (Bock, Bich and Vogel) model [1].
EPM
The elementary physical model (EPM) and EPM2 of Harris and Yung [2] consists of 12-6 Lennard-Jones sites in conjunction with partial charges centred on each of these sites.
Model | (Å) | kJ/mol/rad2 | (Å) | (K) | (Å) | (K) | (Å) | (K) | q(O) (e) | q(C) (e) |
EPM | 1.161 | 1275 | 2.785 | 28.999 | 3.064 | 82.997 | 2.921 | 49.060 | -0.33225 | +0.6645 |
EPM2 | 1.149 | 1236 | 2.757 | 28.129 | 3.033 | 80.507 | 2.892 | 47.588 | -0.32560 | +0.6512 |
The bond bending potential is given by
where degrees.
GCPCDO
Gaussian charge polarizable carbon dioxide (GCPCDO) model [3].
Merker, Engin, Vrabec and Hasse
The Merker, Engin, Vrabec and Hasse model [4] consists of three 12-6 Lennard-Jones sites along with a point quadrupole ( DÅ) placed on the carbon site. The model is given by = 1.2869 Å, 2.8137 Å 12.3724 K and 2.9755 Å, 100.493 K.
Murthy, Singer and McDonald
Murthy, Singer and McDonald proposed four models [5], two models (A1 and A2) consisting of two 12-6 Lennard-Jones sites located roughly on the oxygen atoms, plus a point quadrupole located at the molecular centre of mass. Model B differed from models A1 and A2 in the use of the 9-6 Lennard-Jones potential, and model C was a three site model using the Lorentz-Berthelot combining rules for the C-O interactions.
MYVPBMM
The Mognetti et al. model [6] [7] is a coarse–grained model having either explicit (point) quadrupolar interactions or spherically averaged quadrupolar interactions, in conjunction with a single 12-6 Lennard-Jones site.
Oakley and Wheatley
The Oakley and Wheatley (OW) model [8].
SAPT-s
SAPT (symmetry-adapted perturbation theory) [9].
SYM
TraPPE
Parameters for CO2 for use in the TraPPE force field are C having K and Å with a partial charge of 0.70 e, and O having K and Å with a partial charge of -0.35 e [12]. The molecular geometry is rigid, linear, with a C-C bond length set at the experimental value of 1.16 Å. Unlike interactions use the Lorentz-Berthelot combining rules.
Zhang and Duan
Parameters for CO2 for the Zhang and Duan model [13] [14] [15] are C having K and Å with a partial charge of 0.5888 e, and O having K and Å with a partial charge of -0.2944 e. The molecular geometry is rigid, linear, with a C-C bond length set at the experimental value of 1.163 Å. Unlike interactions use the Lorentz-Berthelot combining rules.
Phase diagram
Transport properties
[19].
References
- ↑ S. Bock, E. Bich and E. Vogel "A new intermolecular potential energy surface for carbon dioxide from ab initio calculations", Chemical Physics 257 pp. 147-156 (2000)
- ↑ Jonathan G. Harris and Kwong H. Yung "Carbon Dioxide's Liquid-Vapor Coexistence Curve And Critical Properties as Predicted by a Simple Molecular Model", Journal of Physical Chemistry 99 pp. 12021-12024 (1995)
- ↑ Rasmus A. X. Persson "Gaussian charge polarizable interaction potential for carbon dioxide", Journal of Chemical Physics 134 034312 (2011)
- ↑ Thorsten Merker, Cemal Engin, Jadran Vrabec and Hans Hasse "Molecular model for carbon dioxide optimized to vapor-liquid equilibria", Journal of Chemical Physics 132 234512 (2010)
- ↑ C. S. Murthy, K. Singer, and I. R. McDonald "Interaction site models for carbon dioxide", Molecular Physics 44 pp. 135-143 (1981)
- ↑ B. M. Mognetti, L. Yelash, P. Virnau, W. Paul, K. Binder, M. Müller, and L. G. MacDowell "Efficient prediction of thermodynamic properties of quadrupolar fluids from simulation of a coarse-grained model: The case of carbon dioxide", Journal of Chemical Physics 128 104501 (2008)
- ↑ B. M. Mognetti, M. Oettel, P. Virnau, L. Yelash, and K. Binder "Structure and pair correlations of a simple coarse grained model for supercritical carbon dioxide", Molecular Physics 107 pp. 331-341 (2009)
- ↑ Mark T. Oakley and Richard J. Wheatley "Additive and nonadditive models of vapor-liquid equilibrium in CO2 from first principles", Journal of Chemical Physics 130 034110 (2009)
- ↑ Robert Bukowski, Joanna Sadlej, Bogumil Jeziorski, Piotr Jankowski, Krzysztof Szalewicz, Stanislaw A. Kucharski, Hayes L. Williams, and Betsy M. Rice "Intermolecular potential of carbon dioxide dimer from symmetry-adapted perturbation theory", Journal of Chemical Physics 110 pp. 3785- (1999)
- ↑ Kuang Yu, Jesse G. McDaniel, and J. R. Schmidt "Physically Motivated, Robust, ab Initio Force Fields for CO2 and N2", Journal of Physical Chemistry B 115 pp. 10054-10063 (2011)
- ↑ Kuang Yu and J. R. Schmidt "Many-body effects are essential in a physically motivated CO2 force field", Journal of Chemical Physics 136 034503 (2012)
- ↑ Jeffrey J. Potoff and J. Ilja Siepmann "Vapor–liquid equilibria of mixtures containing alkanes, carbon dioxide, and nitrogen", AIChE Journal 47 pp. 1676-1682 (2001)
- ↑ Zhigang Zhang and Zhenhao Duan "An optimized molecular potential for carbon dioxide", Journal of Chemical Physics 122 214507 (2005)
- ↑ Thorsten Merker, Jadran Vrabec, and Hans Hasse "Comment on “An optimized potential for carbon dioxide”", Journal of Chemical Physics 129 087101 (2008)
- ↑ Zhigang Zhang and Zhenhao Duan "Response to "Comment on 'An optimized potential for carbon dioxide' "", Journal of Chemical Physics 129 087102 (2008)
- ↑ L. Glasser "Equations of state and phase diagrams", Journal of Chemical Education 79 874 (2002)
- ↑ A. Herráez, R. M. Hanson, and L. Glasser "Interactive 3D phase diagrams using Jmol" Journal of Chemical Education 86: 566 (2009) and website
- ↑ G. Pérez-Sánchez, D. González-Salgado, M. M. Piñeiro, and C. Vega "Fluid-solid equilibrium of carbon dioxide as obtained from computer simulations of several popular potential models: The role of the quadrupole", Journal of Chemical Physics 138 084506 (2013)
- ↑ C. G. Aimoli, E. J. Maginn and C. R. A. Abreu "Transport properties of carbon dioxide and methane from molecular dynamics simulations", Journal of Chemical Physics 141 134101 (2014)
Related reading
- Trevor G. Gibbons and Michael L. Klein "Thermodynamic properties for a simple model of solid carbon dioxide: Monte Carlo, cell model, and quasiharmonic calculations", Journal of Chemical Physics 60 pp. 112-126 (1974)
- R. Eggenberger, S. Gerber, and H. Huber "The carbon dioxide dimer", Molecular Physics 72 pp. 433-439 (1991)